Bo Li Laboratory Gut Remodeling and Regeneration

Research

We investigate the molecular, cellular, and microenvironmental mechanisms that govern gut remodeling and regeneration across development, injury, and disease. Our work focuses on how stromal, vascular, immune, and neural niche interactions shape tissue homeostasis, injury response, and regenerative capacity in the intestine.

Our research spans three major areas: congenital gut disorders, acquired intestinal injury, and systemic or secondary disease states that affect intestinal structure and function. Through these studies, we aim to define how regenerative competence is disrupted in disease and how it may be restored for therapeutic benefit.

Our translational work includes the development and evaluation of regenerative therapeutic strategies and clinically relevant intervention platforms.

Research Areas

Congenital Gut Disorders

Congenital Gut Disorders

We study developmental disorders such as Hirschsprung disease (HSCR) and anorectal malformations (ARM), with a focus on how abnormal tissue architecture and microenvironmental remodeling impair intestinal function, neuromuscular development, and regenerative potential.

Acquired Intestinal Injury

Acquired Intestinal Injury

We investigate diseases such as necrotizing enterocolitis (NEC) and inflammatory bowel disease (IBD), with particular interest in epithelial injury, stem cell dysfunction, barrier failure, and regenerative breakdown following inflammation or tissue damage.

Systemic and Secondary Injury States

Systemic and Secondary Injury States

We explore how liver and biliary disease, sepsis, and aging-related conditions influence intestinal remodeling, epithelial repair, and tissue adaptation through systemic inflammatory, metabolic, and microenvironmental pathways.

Approaches

Our research integrates complementary experimental and translational platforms to study gut remodeling and regeneration, including:

Selected Publications

A selected list of publications highlighting our work in gut injury, developmental disorders, and regenerative biology is provided below. For a complete publication record, please visit the Publications page.

Exploring the Complex Pathophysiology of Necrotizing Enterocolitis in Preterm Neonates
Exploring the Complex Pathophysiology of Necrotizing Enterocolitis in Preterm Neonates
Bo Li, Mina Yeganeh, Dorothy Lee, Sinobol Chusilp, Felicia Balsamo, Niloofar Ganji, Chen-Yi Wang, Andrea Zito, George Biouss, Agostino Pierro
Annual Review of Pathology: Mechanisms of Disease  ·  26 Jan 2026  ·  doi:10.1146/annurev-pathmechdis-070224-014223
Molecular and Chromatin Accessibility Programs Underlying Epithelial Injury and Impaired Regeneration in Neonatal Necrotizing Enterocolitis
Molecular and Chromatin Accessibility Programs Underlying Epithelial Injury and Impaired Regeneration in Neonatal Necrotizing Enterocolitis
Yi Xiong, Andrea Zito, Haoyan Liang, George Biouss, Jielin Yang, …, Brian T. Kalish, Paul Delgado Olguin, Haitao Zhu, Bo Li, Agostino Pierro
Cellular and Molecular Gastroenterology and Hepatology  ·  01 Jan 2026  ·  doi:10.1016/j.jcmgh.2026.101730
Impairment of stromal-epithelial regenerative cross-talk in Hirschsprung disease primes for the progression to enterocolitis
Impairment of stromal-epithelial regenerative cross-talk in Hirschsprung disease primes for the progression to enterocolitis
Zhen Zhang, Dorothy Lee, Lingya Liu, Yi Xiong, Carol Lee, …, Vivian S. W. Li, Paolo De Coppi, Qian Jiang, Agostino Pierro, Bo Li
Science Translational Medicine  ·  30 Jul 2025  ·  doi:10.1126/scitranslmed.adp4679
Remote ischemic conditioning counteracts the intestinal damage of necrotizing enterocolitis by improving intestinal microcirculation
Remote ischemic conditioning counteracts the intestinal damage of necrotizing enterocolitis by improving intestinal microcirculation
Yuhki Koike, Bo Li, Niloofar Ganji, Haitao Zhu, Hiromu Miyake, …, Luc Mertens, Alan Daneman, Simon Eaton, Philip M. Sherman, Agostino Pierro
Nature Communications  ·  02 Oct 2020  ·  doi:10.1038/s41467-020-18750-9
Impaired Wnt β-catenin pathway leads to dysfunction of intestinal regeneration during necrotizing enterocolitis
Impaired Wnt/β-catenin pathway leads to dysfunction of intestinal regeneration during necrotizing enterocolitis
Bo Li, Carol Lee, Marissa Cadete, Haitao Zhu, Yuhki Koike, …, Pekka Määttänen, Paul Delgado-Olguin, Philip M. Sherman, Augusto Zani, Agostino Pierro
Cell Death & Disease  ·  03 Oct 2019  ·  doi:10.1038/s41419-019-1987-1